Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932165.1_cds_XP_016478751.1_70363
CDS Infomation

[gene=LOC107800118] [db_xref=GeneID:107800118] [protein=uncharacterized protein LOC107800118] [protein_id=XP_016478751.1] [location=join(1006..1167,1743..1827,2573..2643,2734..2822,2913..3156,3897..4009,4217..4307,5554..5682,7230..7780,7873..8296)] [gbkey=CDS]
Sequence

ATGAAATCGAAGATAAAATGGGCAGCACTAGGAGGATTGGTGTTATCATTCGCTTCATTG
CTCGTTCACTTGTTTCTTGCCAAGTCCAGTGCTGATCTTGTTCAATACACTGCTATTACC
CTTTTCACTGAGGATTTAACTCCCACTTTAGCCACCAGAAAGGGTCCTGGGTTTCGCAAG
TTGTGGGGAAATGTGAAGTCATTGGAGCCCTTGCACCCTCATGCAAATCCAAGAAGTACA
TATCCTGTGGCAGTTGAACACAGCAATGGCTTCATCTATGCAAAAATTTCTGGTAGTTTT
GAGAAGATTAGGAACTCGATTGTTGATCTGGTCGCCATATCAAGGCTTTTAAATGCCACC
CTTGTAATCCCAGAGATTCAAGAAAGTACTCGTTCAAAAGGCATCAGTTCCAAGTTCAAG
AGTTTTTCATACCTCTATAATGAGGATCAGTTTATAGCAGCCTTAACAAATGATGTCACC
ATTGTGAAGAGTTTGCCACCTATCTTGAGGGAGGCTAGGAAACGGAAAGAGTACCAGATT
TTCAAGCCCAAAAGTTCTGCTGCTCTAAGATTTTATACTTCTGAAGTTTTACCTAGATTG
AAGAAAGCAAAGGTCATCGGATTAATATTGACAGATGGAGGATGTCTAGAGTCCGCACTT
CCCCCGAGCATGGCTGAGTATCAGAGGCTTAGATGTCGTGTGGCATTTCATGCACTTCAA
TTTCGCCCAGAAATTGTAGCTCTTGGAAAACTCATGGTGGAAAGGTTACAAGCTTCAGGC
CAACCTTACCTTGCCTATCATCCCGGGCTTAAGAGAGATGCTCTAGCCTATCATGGTTGT
GCTGAAATTTTTCAGGATATTCACACAGAACTTATACAATACAGGAGGGCCCAGTTAATT
AAACAAGTAATTATCAGTGAAGAACTTAGTGTTGATTCACATGCTCGGAAGAGAAATGGA
TCGTGCCCACTCATGCCAGAAGAGGTAGGACTTCTGCTTCGAGCCATGGGTTACCCACCT
AGAACAAGAATTTATCTAGCAGGTTCTGAAACCTTTGGCGGACAACGAGTTATGATTCCT
TTACGTGCCATGTACCCCAATTTAGTTGATCGTACTGCGTTGTGCAGCAAAAAAGAGCTA
GCCACTTTAGTTGGCCCAGAAACTCCCCTTCCGCCTGATCCTGATCAGCTTTTACCCGCA
AAAAGCGCAAATCAACTAAAAGCAGAATGGAACAAGGCCGGGCCCCGACCAAGACCTCTA
CCACCTCCTCCTGATCGACCTATCTATCGACATGAAAAAGAAGGCTGGTATGGATGGGTT
GCAGAGAAAGATGTGGAACCAGAACCTTCTCCCAATGATCAGAGGGAGCAAGCACACCGA
TTGCTATGGGATGCTCTTGATTACATAGTCTCAGTGGAAGCTGAAGCTTTTTTTCCTGGT
TTTGACAATGATGGTAGCGGGCCTGATTTTGCCAGCTTGGTGATGGGACACCGACTTTAT
GAGATGGCATCTGCGAGAACATTTCGGCCAAACAGGAAATATCTTGCGGAGCTCTTTAAT
AGTACTGTCGATCATCTTTACTATCCACCTCGTAATTGGACTCTTGCTGTCAGAGAACAC
CTCAATAAAAGCCTGGCAGAAGAGGGCCTTTTGCAGGAATCCAATCGATCAAAAACTAAG
TTTTTCCTCTCTCACCCTATTCCAGAATGCTCATGTTCAACTGTCAAGGCTACTGATATT
TCGCATTCAGGAAAGAACAGCAATCTCCATCTGTTTGAAGGGCAGGGCGAGTGCCCCAGA
TCGATGCAGCAAGAAAGAACTCAAGAGACTAACGCGGATGAAGTTGACTCTCAAGAAGAT
GAAACTGATTTAGACGGGCAGTCAGAATCTGAAGGATACAATGGAACTGATGCAATTCCA
TCCCTGGAACAGGATGAGGAAATGGATCCTGATGATTAG

Peptide Sequence

PEP ID

XP_016478751.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107800118 [Nicotiana tabacum]
Sequence

MKSKIKWAALGGLVLSFASLLVHLFLAKSSADLVQYTAITLFTEDLTPTLATRKGPGFRK
LWGNVKSLEPLHPHANPRSTYPVAVEHSNGFIYAKISGSFEKIRNSIVDLVAISRLLNAT
LVIPEIQESTRSKGISSKFKSFSYLYNEDQFIAALTNDVTIVKSLPPILREARKRKEYQI
FKPKSSAALRFYTSEVLPRLKKAKVIGLILTDGGCLESALPPSMAEYQRLRCRVAFHALQ
FRPEIVALGKLMVERLQASGQPYLAYHPGLKRDALAYHGCAEIFQDIHTELIQYRRAQLI
KQVIISEELSVDSHARKRNGSCPLMPEEVGLLLRAMGYPPRTRIYLAGSETFGGQRVMIP
LRAMYPNLVDRTALCSKKELATLVGPETPLPPDPDQLLPAKSANQLKAEWNKAGPRPRPL
PPPPDRPIYRHEKEGWYGWVAEKDVEPEPSPNDQREQAHRLLWDALDYIVSVEAEAFFPG
FDNDGSGPDFASLVMGHRLYEMASARTFRPNRKYLAELFNSTVDHLYYPPRNWTLAVREH
LNKSLAEEGLLQESNRSKTKFFLSHPIPECSCSTVKATDISHSGKNSNLHLFEGQGECPR
SMQQERTQETNADEVDSQEDETDLDGQSESEGYNGTDAIPSLEQDEEMDPDD

Transcript Sequence

Gene sequence data has not been registered.